Structure of PDB 5hgq Chain C

Receptor sequence
>5hgqC (length=473) Species: 7209 (Loa loa) [Search protein sequence]
EYFKLRTALINERRSKGINPYPHKFHVSISLADFIAKYNSLEKDVILNDI
VQSVAGRVFSKRESGGKLIFYDLHGEGTRLQVLANARFHSGDEAFDNLHD
RIKRGDIIGVNGYPARSKSGELSIIPYEIIQLTPCLHMLPHTHFGLNQET
RYRMRYLDLIMNPDVKNRFVTRSRMISFLRRYLDNLGFLEVETPMMNLIA
GGATAKPFITHHNDLDMDLYLRVAPELYLKMLVVGGIDRVYEIGRVFRNE
GIDQTHNPEFTSCEFYMAYADYEDLMKITEDMLARMVYYMHGTYKIQYHP
NGIVENPVYEVDFTPPFRKVNIYDGLQEKLGIQFPPADTDTDEANKFFDK
LAPRTTARLLDKLIGEFLEPTFISPTFLTGHPQIMSPLAKWHRSIPGLTE
RFELFVVTKEIVNAYTELNDPLTQRLRFDEQENYCTALEYGLPPTAGWGM
GIDRLAMILTDSNNIKEVLFFPA
3D structure
PDB5hgq Protein Translation Enzyme lysyl-tRNA Synthetase Presents a New Target for Drug Development against Causative Agents of Loiasis and Schistosomiasis
ChainC
Resolution3.283 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 LYS C G209 A210 E233 Y273 N430 Y432 G202 A203 E226 Y266 N413 Y415
BS02 KRS C E257 H263 N264 F267 I428 R486 E250 H256 N257 F260 I411 R454
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Thu Nov 28 19:51:25 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '5hgq', asym_id = 'C', title = 'Protein Translation Enzyme lysyl-tRNA Synthetase... Causative Agents of Loiasis and Schistosomiasis '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='5hgq', asym_id='C', title='Protein Translation Enzyme lysyl-tRNA Synthetase... Causative Agents of Loiasis and Schistosomiasis ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0000166,0003676,0004812,0004824,0005524,0005737,0006418,0006430', uniprot = '', pdbid = '5hgq', asym_id = 'C'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0000166,0003676,0004812,0004824,0005524,0005737,0006418,0006430', uniprot='', pdbid='5hgq', asym_id='C')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>