Structure of PDB 5gwr Chain C

Receptor sequence
>5gwrC (length=227) Species: 1428 (Bacillus thuringiensis) [Search protein sequence]
NKIIMISGANSGIGHACIKYFLEKSFHVIALDINNNNLMPLKVVQIDLSN
SEAIHNLFTQLDLEKLSPDILINAAGIREITPVLHLSDDMFKKVIDVNLV
APFILSREVAKRWCESKIKGCIVNIASVSGLMAEPERAAYVASKHALIGL
TKQMAMEFGKQNIRVNSISPGVIRTEALMSMIKSNQSLDTWGLPQDIVSC
IEYLISDQARFITGSNFVIDGGWTAGK
3D structure
PDB5gwr Engineering a short-chain dehydrogenase/reductase for the stereoselective production of (2S,3R,4S)-4-hydroxyisoleucine with three asymmetric centers
ChainC
Resolution2.2 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAD C G11 S14 G15 I16 D35 I36 I56 D57 L58 A84 A85 G86 I87 I135 Y150 K154 T185 G8 S11 G12 I13 D32 I33 I46 D47 L48 A74 A75 G76 I77 I125 Y140 K144 T175
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Dec 1 09:02:46 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '5gwr', asym_id = 'C', title = 'Engineering a short-chain dehydrogenase/reductas...-hydroxyisoleucine with three asymmetric centers '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='5gwr', asym_id='C', title='Engineering a short-chain dehydrogenase/reductas...-hydroxyisoleucine with three asymmetric centers ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0016491', uniprot = '', pdbid = '5gwr', asym_id = 'C'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0016491', uniprot='', pdbid='5gwr', asym_id='C')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>