Structure of PDB 5ekp Chain C

Receptor sequence
>5ekpC (length=307) Species: 1111708 (Synechocystis sp. PCC 6803 substr. Kazusa) [Search protein sequence]
FQSNATIELSIVIPMYNEEDNLEHLFARLLEVLTPLKITYEIICVNDGSK
DKTLKQLIDCYQSNRQIKIVNLSRNFGKEIALSAGIDYAQGNAVIPIDAD
LQDPPELIHELVDKWREGYDIVYATRRSRQGETWVKQFTAKMFYKVIGRM
TEIKIPPNTGDFRLMDRKVVNAIKQLPERTRFMKGLFAWVGYRQTFVLFD
RNYWKLWNFALDGIFSFSLLPLKVWTYLGSIISLLSLAYASFLILKTITL
VDVPGYASLMVAILFLGGVQLISLGVIGEYLGRVYEEVKARPLYLVSDLW
GLEYLPL
3D structure
PDB5ekp Structure of the polyisoprenyl-phosphate glycosyltransferase GtrB and insights into the mechanism of catalysis.
ChainC
Resolution3.194 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 UDP C P10 M11 Y12 D43 K74 A95 Q98 P14 M15 Y16 D47 K78 A99 Q102
BS02 MG C D96 Q98 D100 Q102
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
Cellular Component
GO:0005886 plasma membrane

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Molecular Function
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Cellular Component
External links
PDB RCSB:5ekp, PDBe:5ekp, PDBj:5ekp
PDBsum5ekp
PubMed26729507
UniProtQ55487|Y501_SYNY3 Uncharacterized glycosyltransferase sll0501 (Gene Name=sll0501)

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