Structure of PDB 5byg Chain C

Receptor sequence
>5bygC (length=193) Species: 648242 (Adeno-associated virus 2 Srivastava/1982) [Search protein sequence]
MPGFYEIVIKVPSGISDSFVNWVAEKEWELPPDSDMDLNLIEQAPLTVAE
KLQRDFLTEWRRVSKAPEALFFVQFEKGESYFHMHVLVETTGVKSMVLGR
FLSQIREKLIQRIYRGIEPTLPNWFAVTKTRNGAGGGNKVVDESYIPNFL
LPKTQPELQWAWTNMEQYLSACLNLTERKRLVAQHLTHVSQTQ
3D structure
PDB5byg Structural Insights into the Assembly of the Adeno-associated Virus Type 2 Rep68 Protein on the Integration Site AAVS1.
ChainC
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna C K101 M103 V104 R107 F108 Q111 R138 A141 K94 M96 V97 R100 F101 Q104 R131 A134
BS02 dna C S102 M103 G106 G142 G143 G144 N145 S95 M96 G99 G135 G136 G137 N138
External links
PDB RCSB:5byg, PDBe:5byg, PDBj:5byg
PDBsum5byg
PubMed26370092
UniProtQ89268|REP78_AAV2S Protein Rep78 (Gene Name=Rep78)

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