Structure of PDB 4yak Chain C

Receptor sequence
>4yakC (length=463) Species: 374847 (Candidatus Korarchaeum cryptofilum OPF8) [Search protein sequence]
NDLERLFNPSAIAVVGASKDPSKIGSQILRNLLSYGFKGKVYPINPTADE
LMGLKCYPKVSDVPDKVDVAVISVPSDKVLGVIDDCGKAGVKFAVVITSG
FKEVGNEELEEELVRRAHSYGMRVLGPNIFGYLYAPARLNATFGPKDVLS
GNVAFISQSGALGIALMGYTVVENIGISSIVSVGNKADLDDVDLLDFFDK
DPNTGVIMIYLEGIAPGRGRMFIDVASRVSLRKPIIVIKAGRTEVGARAA
ASHTGSIAGSVAIYESAFKQSGILMAKSVEDAFDWTKALSWNPIPEGERL
IVLTNGGGAGVQSTDTFADNGIYLSKPPESLIQEIKKFVPPFASFANPID
ITGMAPDDWYYMGTLAALKNPDVDALTVLYCQTAVTTPIGVAKGIVDAIK
EAGNSKPVTVGMVGGPEVAEAVSFLNKQRIAAYPTPERASSAMSALYAYA
RARSYVMKSLAVR
3D structure
PDB4yak Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer.
ChainC
Resolution2.464 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) I215 H254
Catalytic site (residue number reindexed from 1) I214 H253
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ACO C G17 S19 K24 N46 P47 V75 P76 S100 N129 I130 F144 G16 S18 K23 N45 P46 V74 P75 S99 N128 I129 F143
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0043758 acetate-CoA ligase (ADP-forming) activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:4yak, PDBe:4yak, PDBj:4yak
PDBsum4yak
PubMed26787904
UniProtB1L3C9

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