Structure of PDB 4sbv Chain C

Receptor sequence
>4sbvC (length=222) Species: 12139 (Southern bean mosaic virus) [Search protein sequence]
QAGVSMAPIAQGTMVKLRPPMLRSSMDVTILSHCELSTELAVTVTIVVTS
ELVMPFTVGTWLRGVAQNWSKYAWVAIRYTYLPSCPTTTSGAIHMGFQYD
MADTLPVSVNQLSNLKGYVTGPVWEGQSGLCFVNNTKCPDTSRAITIALD
TNEVSEKRYPFKTATDYATAVGVNANIGNILVPARLVTAMEGGSSKTAVN
TGRLYASYTIRLIEPIAAALNL
3D structure
PDB4sbv Refined structure of southern bean mosaic virus at 2.9 A resolution.
ChainC
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA C F199 N259 L260 F161 N221 L222
BS02 CA C D138 D141 D100 D103
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005198 structural molecule activity
GO:0005509 calcium ion binding
GO:0008289 lipid binding
GO:0039660 structural constituent of virion
Cellular Component
GO:0019028 viral capsid
GO:0039617 T=3 icosahedral viral capsid

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:4sbv, PDBe:4sbv, PDBj:4sbv
PDBsum4sbv
PubMed
UniProtP03607|CAPSD_SCPMV Capsid protein (Gene Name=ORF3)

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