Structure of PDB 4odo Chain C

Receptor sequence
>4odoC (length=153) Species: 274 (Thermus thermophilus) [Search protein sequence]
MKVGQDKVVTIRYTLQVEGEVLDQGELSYLHGHRNLIPGLEEALEGREEG
EAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNP
MPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVVKVREATPEELLHGHAHP
SGH
3D structure
PDB4odo Molecular insights into substrate recognition and catalytic mechanism of the chaperone and FKBP peptidyl-prolyl isomerase SlyD.
ChainC
Resolution1.599 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 5.2.1.8: peptidylprolyl isomerase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FK5 C T10 R12 E26 T10 R12 E26
BS02 FK5 C A78 D95 G98 A78 D95 G98
BS03 FK5 C Y13 L15 D23 L27 N35 L36 I37 L40 Y63 Y13 L15 D23 L27 N35 L36 I37 L40 Y63
Gene Ontology
Molecular Function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity
GO:0046872 metal ion binding
Biological Process
GO:0042026 protein refolding

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4odo, PDBe:4odo, PDBj:4odo
PDBsum4odo
PubMed27664121
UniProtQ5SLE7

[Back to BioLiP]