Structure of PDB 4m8l Chain C

Receptor sequence
>4m8lC (length=217) Species: 263 (Francisella tularensis) [Search protein sequence]
NQDELKKLAATEAAKSITTEITLGVGTGSTVGFLIEELVNYRDKIKTVVS
SSEDSTRKLKALGFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAALT
REKICVAAAKKFICIIDESKKVNTLGNFPLPIEVIPMARSYIARQIVKLG
GQPVYREQTITDNGNVILDVYNLKIDNPLKLETELNQITGVVTNGIFALK
PADTVIMATKDSNIVVL
3D structure
PDB4m8l crystal structure of RpiA-R5P complex
ChainC
Resolution2.37 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 5.3.1.6: ribose-5-phosphate isomerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 5RP C T34 G35 S36 T37 G88 A89 D90 K100 G101 G103 E109 K127 T27 G28 S29 T30 G81 A82 D83 K93 G94 G96 E102 K120
BS02 ARF C S147 A150 S140 A143
BS03 ARF C V56 S57 V74 D75 V49 S50 V67 D68
BS04 ARF C A150 V154 A143 V147
BS05 ARF C R108 D169 R101 D162
BS06 ARF C P143 G171 P136 G164
BS07 ARF C D61 D169 D54 D162
BS08 ARF C E97 P208 E90 P201
Gene Ontology
Molecular Function
GO:0004751 ribose-5-phosphate isomerase activity
GO:0016853 isomerase activity
Biological Process
GO:0006014 D-ribose metabolic process
GO:0006098 pentose-phosphate shunt
GO:0009052 pentose-phosphate shunt, non-oxidative branch
GO:0044281 small molecule metabolic process
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4m8l, PDBe:4m8l, PDBj:4m8l
PDBsum4m8l
PubMed
UniProtA4IYN5|RPIA_FRATW Ribose-5-phosphate isomerase A (Gene Name=rpiA)

[Back to BioLiP]