Structure of PDB 4d9b Chain C

Receptor sequence
>4d9bC (length=322) Species: 90371 (Salmonella enterica subsp. enterica serovar Typhimurium) [Search protein sequence]
TRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLE
FLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTT
AENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVI
PVGGSSALGAMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGL
EHLMPDVELIGVTVSRSVAEQKPKVIALQQAIAGQLALTATADIHLWDDY
FAPGYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFND
DGPILFIHTGGAPALFAYHPHV
3D structure
PDB4d9b Structural and Mutational Studies on Substrate Specificity and Catalysis of Salmonella typhimurium D-Cysteine Desulfhydrase.
ChainC
Resolution1.67 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) K51 Y261 Y287
Catalytic site (residue number reindexed from 1) K45 Y255 Y281
Enzyme Commision number 4.4.1.15: D-cysteine desulfhydrase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 PMP C N50 K51 N79 G194 S195 A196 T198 Y287 T315 G316 G317 N44 K45 N73 G188 S189 A190 T192 Y281 T309 G310 G311
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0016829 lyase activity
GO:0019148 D-cysteine desulfhydrase activity
Biological Process
GO:0046416 D-amino acid metabolic process

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Molecular Function

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Biological Process
External links
PDB RCSB:4d9b, PDBe:4d9b, PDBj:4d9b
PDBsum4d9b
PubMed22574144
UniProtQ8ZNT7|DCYD_SALTY D-cysteine desulfhydrase (Gene Name=dcyD)

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