Structure of PDB 4d8u Chain C

Receptor sequence
>4d8uC (length=323) Species: 90371 (Salmonella enterica subsp. enterica serovar Typhimurium) [Search protein sequence]
LTRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKL
EFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGT
TAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYV
IPVGGSSALGAMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVG
LEHLMPDVELIGVTVSRSVAEQKPKVIALQQAIAGQLALTATADIHLWDD
YFAPGYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFN
DDGPILFIHTGGAPALFAYHPHV
3D structure
PDB4d8u Structural and Mutational Studies on Substrate Specificity and Catalysis of Salmonella typhimurium D-Cysteine Desulfhydrase.
ChainC
Resolution3.3 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) K51 Y261 Y287
Catalytic site (residue number reindexed from 1) K46 Y256 Y282
Enzyme Commision number 4.4.1.15: D-cysteine desulfhydrase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PO4 C X51 S78 N79 H80 Y287 X46 S73 N74 H75 Y282
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0016829 lyase activity
GO:0019148 D-cysteine desulfhydrase activity
Biological Process
GO:0046416 D-amino acid metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4d8u, PDBe:4d8u, PDBj:4d8u
PDBsum4d8u
PubMed22574144
UniProtQ8ZNT7|DCYD_SALTY D-cysteine desulfhydrase (Gene Name=dcyD)

[Back to BioLiP]