Structure of PDB 4cjc Chain C

Receptor sequence
>4cjcC (length=240) Species: 28116 (Bacteroides ovatus) [Search protein sequence]
MRIGILYICTGKYDIFWKDFYLSAERYFMQDQSFIIEYYVFTDSPKLYDE
ENNKHIHRIKQKNLGWPDNTLKRFHIFLRIKEQLERETDYLFFFNANLLF
TSPIGKEILPPSDSNGLLGTMHPGFYNKPNSEFTYERRDASTAYIPEGEG
RYYYAGGLSGGCTKAYLKLCTTICSWVDRDATNHIIPIWHDQSLINKYFL
DNPPAITLSPAYLYPEGWLLPFEPIILIRDKNKPQYGGHE
3D structure
PDB4cjc Structures of Complexes of a Metal-Independent Glycosyltransferase Gt6 from Bacteroides Ovatus with Udp-Galnac and its Hydrolysis Products.
ChainC
Resolution3.42 Å
3D
structure
Catalytic site residues are labeled in the structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 UD2 C I8 T10 Y13 W66 N69 N95 A96 A155 G156 G157 H190 D191 Q192 K231 I8 T10 Y13 W66 N69 N95 A96 A155 G156 G157 H190 D191 Q192 K231
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Mon Mar 3 04:42:17 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '4cjc', asym_id = 'C', title = 'Structures of Complexes of a Metal-Independent G...tus with Udp-Galnac and its Hydrolysis Products. '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='4cjc', asym_id='C', title='Structures of Complexes of a Metal-Independent G...tus with Udp-Galnac and its Hydrolysis Products. ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0005975,0016020,0016758', uniprot = '', pdbid = '4cjc', asym_id = 'C'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005975,0016020,0016758', uniprot='', pdbid='4cjc', asym_id='C')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>