Structure of PDB 3zfs Chain C

Receptor sequence
>3zfsC (length=278) Species: 145263 (Methanothermobacter marburgensis) [Search protein sequence]
LGTYKEIVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAVVAGPGE
EFWKPQPMVAMSSDELKAAAGTKYTFSPNVMMLKKAVRQYGIEKLGTVAI
PCQTMGIRKMQTYPFGVRFLADKIKLLVGIYCMENFPYTSLQTFICEKLG
VSMELVEKMDIGKGKFWVYTQDDVLTLPLKETHGYEQAGCKICKDYVAEL
ADVSTGSVGSPDGWSTVITRTDAGDSIFKQAVEAGLFETKPIEEVKPGLG
LLEKLAAQKKEKAEKNIAARKEMGLPTP
3D structure
PDB3zfs De Novo Modeling of the F420-Reducing [Nife]-Hydrogenase from a Methanogenic Archaeon by Cryo-Electron Microscopy
ChainC
Resolution4.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.12.98.1: coenzyme F420 hydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 F42 C S209 V210 S217 S207 V208 S215
BS02 SF4 C P103 C104 C134 P101 C102 C132
BS03 FAD C Q24 D25 G26 V29 A72 T74 I132 G208 S209 Q22 D23 G24 V27 A70 T72 I130 G206 S207
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016151 nickel cation binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0050454 coenzyme F420 hydrogenase activity
GO:0050660 flavin adenine dinucleotide binding
GO:0051536 iron-sulfur cluster binding
GO:0051539 4 iron, 4 sulfur cluster binding
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor

View graph for
Molecular Function
External links
PDB RCSB:3zfs, PDBe:3zfs, PDBj:3zfs
PDBsum3zfs
PubMed23483797
UniProtD9PYF6

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