Structure of PDB 3vi4 Chain C

Receptor sequence
>3vi4C (length=589) Species: 9606 (Homo sapiens) [Search protein sequence]
FNLDAEAPAVLSGPPGSFFGFSVEFYRPGTDGVSVLVGAPKANTSQPGVL
QGGAVYLCPWGASPTQCTPIEFDSKGSRLLESSLSSSEGEEPVEYKSLQW
FGATVRAHGSSILACAPLYSWRTEKEPLSDPVGTCYLSTDNFTRILEYAP
CRSDFSWAAGQGYCQGGFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQI
AESYYPEYLINLVQGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDFVA
GVPKGNLTYGYVTILNGSDIRSLYNFSGEQMASYFGYAVAATDVNGDGLD
DLLVGAPLLMDRTPDGRPQEVGRVYVYLQHPAGIEPTPTLTLTGHDEFGR
FGSSLTPLGDLDQDGYNDVAIGAPFGGETQQGVVFVFPGGPGGLGSKPSQ
VLQPLWAASHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKAVVYRGRP
IVSASASLTIFPAMFNPEERSCSLEGNPVACINLSFCLNASGKHVADSIG
FTVELQLDWQKQRALFLASRQATLTQTLLIQNGAREDCREMKIYLRNESD
KLSPIHIALNFSLDPQAPVDSHGLRPALHYQSKSRIEDK
3D structure
PDB3vi4 Crystal structure of alpha5beta1 integrin ectodomain: Atomic details of the fibronectin receptor
ChainC
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C F187 Q221 S224 D227 F187 Q221 S224 D227
BS02 CA C E239 S241 D243 T245 D247 E239 S241 D243 T245 D247
BS03 CA C D293 N295 D297 L299 D301 D293 N295 D297 L299 D301
BS04 CA C D360 D362 D364 Y366 D368 D360 D362 D364 Y366 D368
BS05 CA C D424 D426 N428 Y430 D432 D424 D426 N428 Y430 D432
Gene Ontology
Cellular Component
GO:0008305 integrin complex

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Biological Process
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Cellular Component
External links
PDB RCSB:3vi4, PDBe:3vi4, PDBj:3vi4
PDBsum3vi4
PubMed22451694
UniProtP08648|ITA5_HUMAN Integrin alpha-5 (Gene Name=ITGA5)

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