Structure of PDB 3ubj Chain C

Receptor sequence
>3ubjC (length=320) Species: 641501 (Influenza A virus (A/California/04/2009(H1N1))) [Search protein sequence]
DTLCIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDKHNGKLCKLRGVAPL
HLGKCNIAGWILGNPECESASSWSYIVETPSSDNGTCYPGDFIDYEELRE
QLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKSFYKNLIWLVK
KGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADTYVFVCS
SRYSKKFKPEIAICPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRY
AFAMERNAGSGIIISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKC
PKYVKSTKLRLATGLRNIPS
3D structure
PDB3ubj Structural Characterization of the Hemagglutinin Receptor Specificity from the 2009 H1N1 Influenza Pandemic.
ChainC
Resolution2.25 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SIA C Y98 V135 T136 A137 K145 W153 H183 L194 Q226 Y88 V129 T130 A131 K139 W147 H177 L188 Q220
Gene Ontology
Molecular Function
GO:0046789 host cell surface receptor binding
Biological Process
GO:0019064 fusion of virus membrane with host plasma membrane
Cellular Component
GO:0019031 viral envelope

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3ubj, PDBe:3ubj, PDBj:3ubj
PDBsum3ubj
PubMed22072785
UniProtC3W5S1

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