Structure of PDB 3u58 Chain C

Receptor sequence
>3u58C (length=211) Species: 5911 (Tetrahymena thermophila) [Search protein sequence]
GSLSDQLSKQTLLISQLQVGKNRFSFKFEGRVVYKSSTFQNQQDSKYFFI
TAQDANNQEINLSFWQKVDQSYQTLKVGQYYYFIGGEVKQFKNNLELKFK
FGDYQIIPKETLGGSGGSTLLISEVLKTSKQYLSVLAQVVDIQSSDKNIR
LKICDNSCNQELKVVIFPDLCYEWRDKFSINKWYYFNEFVRQIYNDEVQL
KNNIHSSIKES
3D structure
PDB3u58 Structural basis for Tetrahymena telomerase processivity factor Teb1 binding to single-stranded telomeric-repeat DNA.
ChainC
Resolution2.613 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna C E312 T313 Y388 E444 N459 H461 E110 T111 Y132 E188 N203 H205
BS02 dna C Y249 F251 N263 S265 W267 K291 F293 E298 K300 K302 Y47 F49 N61 S63 W65 K89 F91 E96 K98 K100
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Tue Nov 26 07:46:26 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '3u58', asym_id = 'C', title = 'Structural basis for Tetrahymena telomerase proc... binding to single-stranded telomeric-repeat DNA.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='3u58', asym_id='C', title='Structural basis for Tetrahymena telomerase proc... binding to single-stranded telomeric-repeat DNA.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003676', uniprot = '', pdbid = '3u58', asym_id = 'C'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003676', uniprot='', pdbid='3u58', asym_id='C')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>