Structure of PDB 3roo Chain C

Receptor sequence
>3rooC (length=271) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRAR
WMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISG
CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA
GEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVT
LRCWALGFYPADITLTWQLGEELMELVETRPAGDGTFQKWASVVVPLGKE
QYYTCHVYHQGLPEPLTLRWE
3D structure
PDB3roo Nitro-tyrosination of the immunodominant LCMV epitope gp34-41 alters both its capacity to stabilize H-2Kb and the molecular surface of the MHC complex, affecting TCR recognition
ChainC
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C Y7 E63 K66 N70 F74 D77 L81 Y84 S99 Q114 Y116 Y123 T143 K146 E152 R155 L156 Y159 W167 Y171 Y7 E63 K66 N70 F74 D77 L81 Y84 S99 Q114 Y116 Y123 T143 K146 E152 R155 L156 Y159 W167 Y171
External links
PDB RCSB:3roo, PDBe:3roo, PDBj:3roo
PDBsum3roo
PubMed
UniProtP01901|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)

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