Structure of PDB 3rol Chain C

Receptor sequence
>3rolC (length=272) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRAR
WMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISG
CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA
GEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVT
LRCWALGFYPADITLTWQLNGEELMELVETRPAGDGTFQKWASVVVPLGK
EQYYTCHVYHQGLPEPLTLRWE
3D structure
PDB3rol Nitro-tyrosination of the immunodominant LCMV epitope gp34-41 alters both its capacity to stabilize H-2Kb and the molecular surface of the MHC complex, affecting TCR recognition
ChainC
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C Y7 E63 K66 N70 S73 F74 D77 Y84 Q114 Y116 T143 E152 R155 L156 Y159 W167 Y171 Y7 E63 K66 N70 S73 F74 D77 Y84 Q114 Y116 T143 E152 R155 L156 Y159 W167 Y171
External links
PDB RCSB:3rol, PDBe:3rol, PDBj:3rol
PDBsum3rol
PubMed
UniProtP01901|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)

[Back to BioLiP]