Structure of PDB 3qo6 Chain C

Receptor sequence
>3qo6C (length=328) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
STPKKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGS
GFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLR
IDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREI
SSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASS
GVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLGVSGVLVL
DAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQ
CKVGDEVTVEVLRGDHKEKISVTLEPKP
3D structure
PDB3qo6 Structural adaptation of the plant protease Deg1 to repair photosystem II during light exposure.
ChainC
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C H173 P279 S282 A299 I300 Y301 H65 P171 S174 A191 I192 Y193
BS02 peptide C I336 L337 G338 I339 K340 F341 I228 L229 G230 I231 K232 F233
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:3qo6, PDBe:3qo6, PDBj:3qo6
PDBsum3qo6
PubMed21532594
UniProtO22609|DEGP1_ARATH Protease Do-like 1, chloroplastic (Gene Name=DEGP1)

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