Structure of PDB 3mwt Chain C

Receptor sequence
>3mwtC (length=500) Species: 11622 (Lassa virus Josiah) [Search protein sequence]
KSFLWTQSLRRELSGYCSNIKLQVVKDAQALLHGLDFSEVSNVQRLMRKE
RRDDNDLKRLRDLNQAVNNLVELKSTQQKSILRVGTLTSDDLLILAADLE
KLKSKVIRTERPLSAGVYMGNLSSQQLDQRRALLNMIGMGVVRVWDVKNA
ELLNNQFGTMPSLTLACLTKQGQVDLNDAVQALTDLGLIYTAKYPNTSDL
DRLTQSHPILNMIDSSLNISGYNFSLGAAVKAGACMLNMLETIKVSPQTM
DGILKSILKVKKALGMFISDTPGERNPYENILYKICLSGDGWPYIASRTS
ITGRAWENTVVDGLTYSQLMTLKDAMLQLDPNAKTWMDIEGRPEDPVEIA
LYQPSSGCYIHFFREPTDLKQFKQDAKYSHGIDVTDLFATQPGLTSAVID
ALPRNMVITCQGSDDIRKLLESQGRKDIKLIDIALSKTDSRKYENAVWDQ
YKDLCHMHTGVVVEKEEITPHCALMDCIMFDAAVSGGLLRAVLPRDMVFR
3D structure
PDB3mwt Cap binding and immune evasion revealed by Lassa nucleoprotein structure.
ChainC
Resolution1.982 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.13.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN C D389 E391 D533 D338 E340 D476
BS02 ZN C E399 C506 H509 C529 E348 C455 H458 C472
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0008408 3'-5' exonuclease activity
GO:0016787 hydrolase activity
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0019049 virus-mediated perturbation of host defense response
GO:0039548 symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity
GO:0039689 negative stranded viral RNA replication
GO:0039696 RNA-templated viral transcription
GO:0039724 symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IKBKE activity
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:0030430 host cell cytoplasm
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3mwt, PDBe:3mwt, PDBj:3mwt
PDBsum3mwt
PubMed21085117
UniProtP13699|NCAP_LASSJ Nucleoprotein (Gene Name=N)

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