Structure of PDB 3dh7 Chain C

Receptor sequence
>3dh7C (length=316) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
KHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLK
APFLIGAMTERINLALAEAAEALGVGMMLGSGRILLERPEALRRVRKVAP
KALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNPLQEAVQRGDTD
FRGLVERLAELLPLPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGG
TSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVY
TGTDGAKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTALFA
IGARNPKEARGRVERV
3D structure
PDB3dh7 Crystal structure of type 2 isopentenyl diphosphate isomerase from Thermus thermophilus in complex with inorganic pyrophosphate
ChainC
Resolution2.97 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 5.3.3.2: isopentenyl-diphosphate Delta-isomerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FMN C C14 A65 M66 T67 V189 T217 W219 G263 Y266 A285 R286 C6 A57 M58 T59 V173 T201 W203 G247 Y250 A269 R270
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0000287 magnesium ion binding
GO:0004452 isopentenyl-diphosphate delta-isomerase activity
GO:0010181 FMN binding
GO:0016491 oxidoreductase activity
GO:0016853 isomerase activity
GO:0046872 metal ion binding
GO:0070402 NADPH binding
Biological Process
GO:0008299 isoprenoid biosynthetic process
Cellular Component
GO:0005737 cytoplasm

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Cellular Component
External links
PDB RCSB:3dh7, PDBe:3dh7, PDBj:3dh7
PDBsum3dh7
PubMed18693754
UniProtQ53W52

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