Structure of PDB 3b2d Chain C

Receptor sequence
>3b2dC (length=139) Species: 9606 (Homo sapiens) [Search protein sequence]
AWPTHVVCSDSGLEVLYQSCDPLQDFGFSVEKCSKQLKSNINIRFGIILR
EDIKELFLDLALMSQGSSVLNFSYPICEAALPKFSFCGRRKGEQIYYAGP
VNNPEFTIPQGEYQVLLELYTEKRSTVACANATIMCSEF
3D structure
PDB3b2d Crystal Structures of Mouse and Human RP105/MD-1 Complexes Reveal Unique Dimer Organization of the Toll-Like Receptor Family.
ChainC
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN C F82 Y145 F57 Y120
BS02 MAN C D84 Y145 R149 D59 Y120 R124
BS03 MAN C P100 E103 P75 E78
Gene Ontology
Molecular Function
GO:0005515 protein binding
Biological Process
GO:0006954 inflammatory response
GO:0006955 immune response
GO:0031663 lipopolysaccharide-mediated signaling pathway
GO:0031666 positive regulation of lipopolysaccharide-mediated signaling pathway
GO:0045087 innate immune response
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3b2d, PDBe:3b2d, PDBj:3b2d
PDBsum3b2d
PubMed21959264
UniProtO95711|LY86_HUMAN Lymphocyte antigen 86 (Gene Name=LY86)

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