Structure of PDB 2zok Chain C

Receptor sequence
>2zokC (length=258) Species: 10090 (Mus musculus) [Search protein sequence]
PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGRTDSPKAHVTHHPRKEVTLRCWALGF
YPADITLTWQLDMELVETRPAGDGTFQKWASVVVPLEQNYTCRVYHEGLP
EPLTLRWE
3D structure
PDB2zok Structural and biological basis of CTL escape in coronavirus-infected mice.
ChainC
Resolution2.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C Y7 E63 Q65 K66 Q70 W73 V76 S77 N80 Y84 L95 Q97 T143 K146 W147 H155 Y156 Y159 W167 Y171 Y6 E62 Q64 K65 Q69 W72 V75 S76 N79 Y83 L94 Q96 T142 K145 W146 H154 Y155 Y158 W166 Y170
External links
PDB RCSB:2zok, PDBe:2zok, PDBj:2zok
PDBsum2zok
PubMed18322201
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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