Structure of PDB 2xy3 Chain C

Receptor sequence
>2xy3C (length=128) Species: 1423 (Bacillus subtilis) [Search protein sequence]
MQIKIKYLDETQTRINKMEQGDWIDLRAAEDVAIKKDEFKLVPLGVAMEL
PEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDT
KIKKGDRICQFRIMKKMPAVDLIEVDRL
3D structure
PDB2xy3 The Structure of Bacillus Subtilis Sp Beta Prophage Dutpase and its Complexes with Two Nucleotides
ChainC
Resolution2.55 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.6.1.23: dUTP diphosphatase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 DUP C N74 I79 Y83 F91 P93 N74 I79 Y83 F91 P93
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004170 dUTP diphosphatase activity
GO:0016787 hydrolase activity
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006226 dUMP biosynthetic process
GO:0009117 nucleotide metabolic process
GO:0046081 dUTP catabolic process
Cellular Component
GO:0032991 protein-containing complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:2xy3, PDBe:2xy3, PDBj:2xy3
PDBsum2xy3
PubMed21358047
UniProtO34919|YOSS_BACSU SPbeta prophage-derived deoxyuridine 5'-triphosphate nucleotidohydrolase YosS (Gene Name=yosS)

[Back to BioLiP]