Structure of PDB 2rid Chain C

Receptor sequence
>2ridC (length=149) Species: 9606 (Homo sapiens) [Search protein sequence]
LRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFTE
AQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFTY
PTGESLVYSNWAPGEPNDDGGSEDCVEIFTNGKWNDRACGEKRLVVCEF
3D structure
PDB2rid Recognition of heptoses and the inner core of bacterial lipopolysaccharides by surfactant protein d.
ChainC
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA C E321 N323 E329 N341 D342 E115 N117 E123 N135 D136
BS02 CA C D297 E301 D324 E329 D330 D91 E95 D118 E123 D124
BS03 CA C E301 D330 E95 D124
BS04 291 C E321 N323 D325 E329 N341 R343 E115 N117 D119 E123 N135 R137 MOAD: ic50=1.7mM
External links
PDB RCSB:2rid, PDBe:2rid, PDBj:2rid
PDBsum2rid
PubMed18092821
UniProtP35247|SFTPD_HUMAN Pulmonary surfactant-associated protein D (Gene Name=SFTPD)

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