Structure of PDB 2rib Chain C

Receptor sequence
>2ribC (length=150) Species: 9606 (Homo sapiens) [Search protein sequence]
SLRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVKPFT
EAQLLCTQAGGQLASPRSAAENAALQQLVVAKNEAAFLSMTDSKTEGKFT
YPTGESLVYSNWAPGEPNDDGGSEDCVEIFTNGKWNDRACGEKRLVVCEF
3D structure
PDB2rib Recognition of heptoses and the inner core of bacterial lipopolysaccharides by surfactant protein d.
ChainC
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA C E321 N323 E329 N341 D342 E116 N118 E124 N136 D137
BS02 CA C D297 E301 D324 E329 D330 D92 E96 D119 E124 D125
BS03 CA C E301 D330 E96 D125
BS04 GMH C E321 N323 D325 E329 N341 E116 N118 D120 E124 N136
External links
PDB RCSB:2rib, PDBe:2rib, PDBj:2rib
PDBsum2rib
PubMed18092821
UniProtP35247|SFTPD_HUMAN Pulmonary surfactant-associated protein D (Gene Name=SFTPD)

[Back to BioLiP]