Structure of PDB 2obe Chain C

Receptor sequence
>2obeC (length=909) Species: 175567 (Simian adenovirus 25) [Search protein sequence]
MLPQWAYMHIAGQDASEYLSPGLVQFARATDTYFSLGNKFRNPTVAPTHD
VTTDRSQRLTLRFVPVDREDNTYSYKVRYTLAVGDNRVLDMASTYFDIRG
VLDRGPSFKPYSGTAYNSLAPKGAPNTCQWTYKTEKTYTYGNAPVQGINI
TKDGIQLGTDTDDQPIYADKTYQPEPQVGDAEWHEKYGGRALKPDTKMKP
CYGSFAKPTNKEGGQANVKTGTGTTKEYDIDMAFFDNRSAAAAGLAPEIV
LYTENVDLETPDTHIVYKAGTDDSSSSINLGQQAMPNRPNYIGFRDNFIG
LMYYNSTGNMGVLAGQASQLNAVVDLQDRNTELSYQLLLDSLGDRTRYFS
MWNQAVDSYDPDVRIIENHGVEDELPNYCFPLDAVGRTDTYQGIKANTTW
TKDDSVNDANEIGKGNPFAMEINIQANLWRNFLYANVALYLPDSYKYTPA
NVTLPTNTNTYDYMNGRVVAPSLVDSYINIGARWSLDPMDNVNPFNHHRN
AGLRYRSMLLGNGRYVPFHIQVPQKFFAIKSLLLLPGSYTYEWNFRKDVN
MILQSSLGNDLRTDGASISFTSINLYATFFPMAHNTASTLEAMLRNDTND
QSFNDYLSAANMLYPIPANATNVPISIPSRNWAAFRGWSFTRLKTKETPS
LGSGFDPYFVYSGSIPYLDGTFYLNHTFKKVSITFDSSVSWPGNDRLLTP
NEFEIKRTVDGEGYNVAQCNMTKDWFLVQMLAHYNIGYQGFYVPEGYKDR
MYSFFRNFQPMSRQVVDEVNYKDYQAVTLAYQHNNSGFVGYLAPTMRQGQ
PYPANYPYPLIGKSAVTSVTQKKFLCDRVMWRIPFSSNFMSMGALTDLGQ
NMLYANSAHALDMNFEVDPMDESTLLYVVFEVFDVVRVHQPHRGVIEAVY
LRTPFSAGN
3D structure
PDB2obe Structure-based identification of a major neutralizing site in an adenovirus hexon
ChainC
Resolution2.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 2HP C D730 N735 K842 D710 N715 K822
BS02 2HP C P110 D482 P106 D462
BS03 2HP C W504 L506 D507 R783 W484 L486 D487 R763
BS04 2HP C T57 D58 R59 A603 H604 T53 D54 R55 A583 H584
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075521 microtubule-dependent intracellular transport of viral material towards nucleus
Cellular Component
GO:0019028 viral capsid
GO:0039623 T=25 icosahedral viral capsid
GO:0042025 host cell nucleus
GO:0043657 host cell

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2obe, PDBe:2obe, PDBj:2obe
PDBsum2obe
PubMed17108028
UniProtQ8UY79

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