Structure of PDB 2nyg Chain C

Receptor sequence
>2nygC (length=270) Species: 1423 (Bacillus subtilis) [Search protein sequence]
LKKIVESTTFPRTKQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVA
VIQALIDVVTEEGTIVMPSQSVELSDPKEWGNPPVPEEWWDIIRESMPAY
NSNYTPTTRGMGQIVELFRSYPEVKRSNHPNYSFVAWGKHKNKILNQHPL
EFGLGEQSPLGKLYIRESYVLLLGADFDSSTCFHLAEYRIPYQKIINRGA
PIIVEGKRVWKEYKELEFREELFQEVGQAFEAEHNMKVGKVGSANCRLFS
LTEAVDFAEKWFINNDSKNI
3D structure
PDB2nyg Crystal structure of YokD protein from Bacillus subtilis
ChainC
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.3.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 COA C L2 S37 S38 L39 S40 G43 W44 V45 G48 G113 Q114 A176 L1 S36 S37 L38 S39 G42 W43 V44 G47 G112 Q113 A175
Gene Ontology
Molecular Function
GO:0008080 N-acetyltransferase activity
GO:0016746 acyltransferase activity
Biological Process
GO:0046677 response to antibiotic

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Molecular Function
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Biological Process
External links
PDB RCSB:2nyg, PDBe:2nyg, PDBj:2nyg
PDBsum2nyg
PubMed
UniProtO32003|YOKD_BACSU SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD (Gene Name=yokD)

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