Structure of PDB 2ms0 Chain C

Receptor sequence
>2ms0C (length=56) Species: 11786 (Murine leukemia virus) [Search protein sequence]
ATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPR
PQTSLL
3D structure
PDB2ms0 A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.
ChainC
ResolutionN/A
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.26.4: ribonuclease H.
3.4.23.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna C Q112 R117 R118 L121 D122 R123 Q125 A127 Y128 W135 A136 K141 K142 Q12 R17 R18 L21 D22 R23 Q25 A27 Y28 W35 A36 K41 K42
BS02 ZN C C126 H134 C139 C26 H34 C39
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:2ms0, PDBe:2ms0, PDBj:2ms0
PDBsum2ms0
PubMed25209668
UniProtP03355|POL_MLVMS Gag-Pol polyprotein (Gene Name=gag-pol)

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