Structure of PDB 2iz9 Chain C

Receptor sequence

>2iz9C (length=129) Species: 12022 (Escherichia phage MS2) [Search protein sequence]

ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQ
SSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSD
CELIVKAMQGLLKDGNPIPSAIAANSGIY

3D structure

PDB

2iz9 Deletion of a Single Hydrogen Bonding Atom from the MS2 RNA Operator Leads to Dramatic Rearrangements at the RNA-Coat Protein Interface

Chain

Resolution

2.85 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	C	Q50 S52 A53	Q50 S52 A53
BS02	rna	C	K43 T45 S47 T59 K61 Y85	K43 T45 S47 T59 K61 Y85

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0005198	structural molecule activity
GO:0042802	identical protein binding

	Biological Process
GO:0006417	regulation of translation
GO:1904972	negative regulation of viral translation

	Cellular Component
GO:0019028	viral capsid
GO:0039617	T=3 icosahedral viral capsid

External links