Structure of PDB 1zv8 Chain C

Receptor sequence
>1zv8C (length=46) [Search protein sequence]
QKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQ
3D structure
PDB1zv8 Structures and Polymorphic Interactions of Two Heptad-Repeat Regions of the SARS Virus S2 Protein.
ChainC
Resolution1.94 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C F9 N10 I13 Q17 L20 S24 L27 G28 Q31 N35 A38 N42 F8 N9 I12 Q16 L19 S23 L26 G27 Q30 N34 A37 N41
BS02 peptide C Q8 K11 A12 Q15 E18 S19 T22 T23 A26 K29 L30 V33 N37 Q7 K10 A11 Q14 E17 S18 T21 T22 A25 K28 L29 V32 N36
Gene Ontology
Biological Process
GO:0019064 fusion of virus membrane with host plasma membrane
GO:0039654 fusion of virus membrane with host endosome membrane
GO:0046813 receptor-mediated virion attachment to host cell
GO:0075509 endocytosis involved in viral entry into host cell
Cellular Component
GO:0016020 membrane
GO:0019031 viral envelope
GO:0055036 virion membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1zv8, PDBe:1zv8, PDBj:1zv8
PDBsum1zv8
PubMed16698550
UniProtP59594|SPIKE_SARS Spike glycoprotein (Gene Name=S)

[Back to BioLiP]