Structure of PDB 1yjm Chain C

Receptor sequence
>1yjmC (length=101) Species: 10090 (Mus musculus) [Search protein sequence]
RGRLWLQSPTGGPPPIFLPSDGQALVLGRGPLTQVTDRKCSRNQVELIAD
PESRTVAVKQLGVNPSTVGVHELKPGLSGSLSLGDVLYLVNGLYPLTLRW
E
3D structure
PDB1yjm The molecular architecture of the mammalian DNA repair enzyme, polynucleotide kinase.
ChainC
Resolution2.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.1.78: polynucleotide 5'-hydroxyl-kinase.
3.1.3.32: polynucleotide 3'-phosphatase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C R35 G36 P37 Q40 T42 R44 S47 R48 R29 G30 P31 Q34 T36 R38 S41 R42
External links
PDB RCSB:1yjm, PDBe:1yjm, PDBj:1yjm
PDBsum1yjm
PubMed15749016
UniProtQ9JLV6|PNKP_MOUSE Bifunctional polynucleotide phosphatase/kinase (Gene Name=Pnkp)

[Back to BioLiP]