Structure of PDB 1vf5 Chain C

Receptor sequence
>1vf5C (length=286) Species: 83541 (Mastigocladus laminosus) [Search protein sequence]
YPFWAQQTYPPTPREPTGRIVCANCHLAAKPAEVEVPQSVLPDTVFKAVV
KIPYDTKLQQVAADGSKVGLNVGAVLMLPEGFKIAPEERIPEELKKEVGD
VYFQPYKEGQDNVLLVGPLPGEQYQEIVFPVLSPNPTTDKNIHFGKYAIH
LGANRGRGQIYPTGEKSNNNVFTASATGTITKIAKEEDEYGNVKYQVSIQ
TDSGKTVVDTIPAGPELIVSEGQAVKAGEALTNNPNVGGFGQDDTEIVLQ
DPNRVKWMIAFICLVMLAQLMLILKKKQVEKVQAAE
3D structure
PDB1vf5 Structure of the Cytochrome B6F Complex of Oxygenic Photosynthesis: Tuning the Cavity
ChainC
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C Q38 L41 V255 M258 I259 I262 M266 Q269 L270 I273 K277 Q278 Q38 L41 V255 M258 I259 I262 M266 Q269 L270 I273 K277 Q278
BS02 HEM C Y1 P2 W4 C22 C25 H26 Q60 N71 V72 G73 A74 G156 R157 G158 I160 Y161 Y1 P2 W4 C22 C25 H26 Q60 N71 V72 G73 A74 G156 R157 G158 I160 Y161
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0009055 electron transfer activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0015979 photosynthesis
Cellular Component
GO:0009579 thylakoid
GO:0016020 membrane
GO:0031676 plasma membrane-derived thylakoid membrane
GO:0042651 thylakoid membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1vf5, PDBe:1vf5, PDBj:1vf5
PDBsum1vf5
PubMed14526088
UniProtP83793|CYF_MASLA Cytochrome f (Gene Name=petA)

[Back to BioLiP]