Structure of PDB 1t8q Chain C

Receptor sequence
>1t8qC (length=328) Species: 562 (Escherichia coli) [Search protein sequence]
NEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLH
DHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKK
VQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFH
HQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGM
ELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIG
PDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVN
QLYDALYNKAGVNGLFTDFPDKAVKFLN
3D structure
PDB1t8q The crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
ChainC
Resolution2.0 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) H36 R37 E63 D65 H78 E171 K173 D346
Catalytic site (residue number reindexed from 1) H8 R9 E35 D37 H50 E143 K145 D318
Enzyme Commision number 3.1.4.46: glycerophosphodiester phosphodiesterase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG C E63 D65 E171 E35 D37 E143
Gene Ontology
Molecular Function
GO:0008081 phosphoric diester hydrolase activity
Biological Process
GO:0006629 lipid metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1t8q, PDBe:1t8q, PDBj:1t8q
PDBsum1t8q
PubMed
UniProtP09394|GLPQ_ECOLI Glycerophosphodiester phosphodiesterase, periplasmic (Gene Name=glpQ)

[Back to BioLiP]