Structure of PDB 1nwq Chain C

Receptor sequence
>1nwqC (length=60) Species: 10116 (Rattus norvegicus) [Search protein sequence]
NSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQ
LSRELDTLRG
3D structure
PDB1nwq Structural Basis for DNA Recognition by the Basic Region Leucine Zipper Transcription Factor CCAAT/enhancer Binding Protein Alpha
ChainC
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna C Y285 R289 N292 N293 R297 R300 Y5 R9 N12 N13 R17 R20
BS02 dna C K298 S299 R300 K18 S19 R20
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006351 DNA-templated transcription
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1nwq, PDBe:1nwq, PDBj:1nwq
PDBsum1nwq
PubMed12578822
UniProtP05554|CEBPA_RAT CCAAT/enhancer-binding protein alpha (Gene Name=Cebpa)

[Back to BioLiP]