Structure of PDB 1llm Chain C
Receptor sequence
>1llmC (length=87) Species:
10090,559292
[
Search protein sequence
]
MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH
RDIQHILPILEDKVEELLSKNYHLENEVARLKKLVGE
3D structure
PDB
1llm
Structure of a designed dimeric zinc finger protein bound to DNA.
Chain
C
Resolution
1.5 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
dna
C
D117 S144 D145 K148 R149
D17 S44 D45 K48 R49
BS02
dna
C
R111 S114 R115 H118 H122 T125 R139 F141 R143 E146 H150 Q154
R11 S14 R15 H18 H22 T25 R39 F41 R43 E46 H50 Q54
BS03
ZN
C
C106 C109 H122 H126
C6 C9 H22 H26
BS04
ZN
C
C134 C137 H150 H155
C34 C37 H50 H55
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1llm
,
PDBe:1llm
,
PDBj:1llm
PDBsum
1llm
PubMed
14621985
UniProt
P03069
|GCN4_YEAST General control transcription factor GCN4 (Gene Name=GCN4);
P08046
|EGR1_MOUSE Early growth response protein 1 (Gene Name=Egr1)
[
Back to BioLiP
]