Structure of PDB 1knz Chain C

Receptor sequence
>1knzC (length=154) Species: 10923 (Simian rotavirus A/SA11) [Search protein sequence]
TQQMAVSIINSSFEAAVVAATSALENMGIEYDYQDIYSRVKNKFDFVMDD
SGVKNNPIGKAITIDQALNNKFGSAIRNRNWLADTSRPAKLDEDVNKLRM
MLGIDQKMRVLNACFSVKRIPGKSSSIIKCTKLMRDKLERGEVEVDDSFV
DEKM
3D structure
PDB1knz Recognition of the rotavirus mRNA 3' consensus by an asymmetric NSP3 homodimer.
ChainC
Resolution2.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna C N62 G65 K66 T69 S80 R83 N84 W87 R93 D100 G131 K132 S133 S134 S135 N56 G59 K60 T63 S74 R77 N78 W81 R87 D94 G122 K123 S124 S125 S126 PDBbind-CN: Kd=79nM
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:1knz, PDBe:1knz, PDBj:1knz
PDBsum1knz
PubMed11792322
UniProtP03536|NSP3_ROTS1 Non-structural protein 3

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