Structure of PDB 1d9k Chain C

Receptor sequence
>1d9kC (length=183) Species: 10090 (Mus musculus) [Search protein sequence]
IEADHVGSYGITVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFA
QLRRFEPQGGLQNIATGKHNLEILTKRSNSTPATNEAPQATVFPKSPVLL
GQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFFVNRDYSFHKLS
YLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEI
3D structure
PDB1d9k The crystal structure of a T cell receptor in complex with peptide and MHC class II.
ChainC
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide C Y9 T11 F24 L51 R52 R53 N62 T65 G66 H68 N69 I72 Y9 T12 F25 L52 R53 R54 N63 T66 G67 H69 N70 I73
Gene Ontology
Biological Process
GO:0006955 immune response
GO:0019882 antigen processing and presentation
Cellular Component
GO:0016020 membrane
GO:0042613 MHC class II protein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:1d9k, PDBe:1d9k, PDBj:1d9k
PDBsum1d9k
PubMed10583947
UniProtP01910|HA2K_MOUSE H-2 class II histocompatibility antigen, A-K alpha chain (Gene Name=H2-Aa)

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