Structure of PDB 1c04 Chain C

Receptor sequence

>1c04C (length=67) Species: 2238 (Haloarcula marismortui)

KTPPAAVLLKKAAGIESGSGEPNRNKVATIKRDKVREIAELKMPDLNAAS
IEAAMRMIEGTARSMGI

3D structure

• PDB: 1c04 Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
• Chain: C
• Resolution: 5.0 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	C	K6 T7 P9 A11 V12 K15 E21 S22 G23 E26 P27 K47 D50 L51 N52 A53 A54 R61 M62 S69 M70	K1 T2 P4 A6 V7 K10 E16 S17 G18 E21 P22 K42 D45 L46 N47 A48 A49 R56 M57 S64 M65

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome

External links

• PDB: RCSB:1c04, PDBe:1c04, PDBj:1c04
• PDBsum: 1c04
• PubMed: 10476961
• UniProt: P56210|RL11_GEOSE Large ribosomal subunit protein uL11 (Fragment) (Gene Name=rplK)