Structure of PDB 7o7y Chain Bv

Receptor sequence
>7o7yBv (length=212) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
SRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRL
KSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAK
KYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTI
KFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALY
IKSTMGKPQRLY
3D structure
PDB7o7y Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
ChainBv
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Bv Q44 K47 R48 Q39 K42 R43
BS02 rna Bv R25 K27 F28 T31 E33 K39 N40 K98 K102 K105 C164 A166 Q199 R202 Y205 K207 T209 P213 R20 K22 F23 T26 E28 K34 N35 K93 K97 K100 C159 A161 Q194 R197 Y200 K202 T204 P208
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000470 maturation of LSU-rRNA
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:7o7y, PDBe:7o7y, PDBj:7o7y
PDBsum7o7y
PubMed34029205
UniProtG1SKZ8|RL10A_RABIT Large ribosomal subunit protein uL1 (Gene Name=RPL10A)

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