Structure of PDB 8p2k Chain Bt

Receptor sequence
>8p2kBt (length=156) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
EIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRI
TVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDE
IVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSG
AVECPA
3D structure
PDB8p2k NAC controls cotranslational N-terminal methionine excision in eukaryotes.
ChainBt
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Bt Y14 R16 T25 R57 S76 A77 S78 R92 K96 N97 I98 R119 L121 A122 R123 K130 E131 G134 T135 Q137 S138 Y6 R8 T17 R49 S68 A69 S70 R84 K88 N89 I90 R111 L113 A114 R115 K122 E123 G126 T127 Q129 S130
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8p2k, PDBe:8p2k, PDBj:8p2k
PDBsum8p2k
PubMed37347872
UniProtG1SMR7|RL12_RABIT Large ribosomal subunit protein uL11 (Gene Name=RPL12)

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