Structure of PDB 4v8y Chain Bq

Receptor sequence

>4v8yBq (length=143) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]

GIREKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVL
MGKNTMVRRAIRGFLSDLPDFEKLLPFVKGNVGFVFTNEPLTEIKNVIVS
NRVAAGLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIA

3D structure

PDB

4v8y Molecular architecture of a eukaryotic translational initiation complex.

Chain

Resolution

4.3 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Bq	I4 R5 V28 G29 V30 N32 V33 S34 S35 Q36 Q37 M38 H39 R42 K43 R46 V51 L52 M53 G54 K55 N56 T57 R61 K81 G82 N83 R104 V105 A106 A107 L185 T186 V187	I2 R3 V26 G27 V28 N30 V31 S32 S33 Q34 Q35 M36 H37 R40 K41 R44 V49 L50 M51 G52 K53 N54 T55 R59 K79 G80 N81 R102 V103 A104 A105 L107 T108 V109

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding
GO:0070180	large ribosomal subunit rRNA binding

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0002181	cytoplasmic translation
GO:0042254	ribosome biogenesis

	Cellular Component
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:0030686	90S preribosome
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:4v8y, PDBe:4v8y, PDBj:4v8y
PDBsum	4v8y
PubMed	24200810
UniProt	P05317\|RLA0_YEAST Large ribosomal subunit protein uL10 (Gene Name=RPP0)