Structure of PDB 8oit Chain Bp

Receptor sequence
>8oitBp (length=147) Species: 9606 (Homo sapiens) [Search protein sequence]
DPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVEL
TFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPK
LHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRYNDITKVYTQVE
3D structure
PDB8oit Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
ChainBp
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Bp F88 S122 L123 K125 Q126 F32 S66 L67 K69 Q70
BS02 rna Bp R67 R70 R11 R14
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0009653 anatomical structure morphogenesis
GO:0032543 mitochondrial translation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005761 mitochondrial ribosome
GO:0005762 mitochondrial large ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8oit, PDBe:8oit, PDBj:8oit
PDBsum8oit
PubMed37141370
UniProtQ9NQ50|RM40_HUMAN Large ribosomal subunit protein mL40 (Gene Name=MRPL40)

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