Structure of PDB 8ova Chain Bm

Receptor sequence
>8ovaBm (length=98) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
APVPRTGIIAGFNKGYKTTRRARRPSSNDRYALPHKKLRAVKAIISDLVG
FSPMERRVQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQ
3D structure
PDB8ova A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei.
ChainBm
Resolution2.47 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Bm G22 Y23 N35 R37 Y38 A39 P41 H42 K44 R46 K49 R84 L85 R94 K97 G15 Y16 N28 R30 Y31 A32 P34 H35 K37 R39 K42 R77 L78 R87 K90
BS02 rna Bm K75 R76 K68 R69
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8ova, PDBe:8ova, PDBj:8ova
PDBsum8ova
PubMed37985661
UniProtQ38CY6

[Back to BioLiP]