Structure of PDB 8oin Chain Bm

Receptor sequence
>8oinBm (length=393) Species: 9823 (Sus scrofa) [Search protein sequence]
AYEWGVRSTRKPEPPPLDRVYEIPGLEPITYAGKMHFMPGLARPVFPPWD
PGWTHPKFRRLPPLHEHPLYKDQACYVFHQRCRLLEGVKQALWLTKTQLI
EGLPEKVLRLADDPRNHIENQDERVLNAISHARLWHSTEDIPKRETYCPV
IVDSLIQLCKSQILKHPSLARRICAQNNTLSATWNRESILLQVHGSSGAR
LNAKDPLPPVASQEEVEATKNHVLETFYPISPTMGLQECNVYDVNDDTGF
QEGYPYPCPHTLYFLESANLRPRRFQPDQLRAKMILFAFGSALAQARLLY
GNDSKVLEQPVVVQSVGTDGRLFQFLVLQLNTTDLASDEGVKNLAWVDSD
QLLYQHFWCLPVIKKKVVVEPVGPIGFQPETFRKFLALYLHGA
3D structure
PDB8oin Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
ChainBm
Resolution3.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Bm Y31 E32 W33 V35 R36 S37 F66 P85 K86 F87 H96 H108 R110 R112 H223 Q266 L299 R300 R302 Q305 R350 H385 W387 L389 K395 Y2 E3 W4 V6 R7 S8 F37 P56 K57 F58 H67 H79 R81 R83 H194 Q237 L270 R271 R273 Q276 R321 H356 W358 L360 K366
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005739 mitochondrion
GO:0005762 mitochondrial large ribosomal subunit
GO:0005840 ribosome

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8oin, PDBe:8oin, PDBj:8oin
PDBsum8oin
PubMed37141370
UniProtA0A287BIV6

[Back to BioLiP]