Structure of PDB 8btk Chain Bm

Receptor sequence

>8btkBm (length=52) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKK
VK

3D structure

PDB

8btk Molecular basis of the TRAP complex function in ER protein biogenesis.

Chain

Resolution

3.5 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Bm	I95 R97 Y100 R102 H104 R106 V108 N109 R111 K112 K113 K114 G116 H117 N119 R122 K124 K125	I19 R21 Y24 R26 H28 R30 V32 N33 R35 K36 K37 K38 G40 H41 N43 R46 K48 K49
BS02	ZN	Bm	C96 C110 C115	C20 C34 C39

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome
GO:0031386	protein tag activity
GO:0031625	ubiquitin protein ligase binding

	Biological Process
GO:0006412	translation
GO:0016567	protein ubiquitination
GO:0019941	modification-dependent protein catabolic process

External links