Structure of PDB 9f1d Chain Bj

Receptor sequence

>9f1dBj (length=86) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSA
KAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPK

3D structure

PDB

9f1d NAC guides a ribosomal multienzyme complex for nascent protein processing.

Chain

Resolution

3.26 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	rna	Bj	T2 K3 G4 T5 S6 S7 F8 G9 K10 R11 R12 N13 K14 T15 H16 K25 H28 Q30 K31 G35 K36 R43 K44 R45 K46 Y47 N48 W49 K52 A53 R55 R56 T58 T59 Y71 E80 G81	T1 K2 G3 T4 S5 S6 F7 G8 K9 R10 R11 N12 K13 T14 H15 K24 H27 Q29 K30 G34 K35 R42 K43 R44 K45 Y46 N47 W48 K51 A52 R54 R55 T57 T58 Y70 E79 G80
BS02	rna	Bj	R20 R21 G23 K42 N57 T59 G62 R63 M64 R65 H66 L67 K68 Y71 R72 F74 H76 R79 E80 G81 T82 P84 K85 K87	R19 R20 G22 K41 N56 T58 G61 R62 M63 R64 H65 L66 K67 Y70 R71 F73 H75 R78 E79 G80 T81 P83 K84 K86
BS03	ZN	Bj	C19 C22 C34 C37	C18 C21 C33 C36

External links

PDB	RCSB:9f1d, PDBe:9f1d, PDBj:9f1d
PDBsum	9f1d
PubMed	39169182
UniProt	U3KPD5\|RL37_RABIT Large ribosomal subunit protein eL37 (Gene Name=RPL37)