Structure of PDB 8a22 Chain Bj

Receptor sequence
>8a22Bj (length=401) Species: 353565 (Polytomella magna) [Search protein sequence]
NPTDSFYEIELTVKAYEERYVDMAVNALRDLLMISFTPKKFSPMGQGRYA
KDIEPNNPIDLYIPTTMERVKVDWKKTRFTLIRGPFVDKRGMEQFERREY
HSKIKASTTSLTELQWLLDALKLYEFTGVQIEAEVTSPGFVAAHEHQAVL
KTSRPTHGEAGDFVDSLFLDDQSSILDAGHLRHIKDFVPSGFGSEMQTAL
AALRNVMHQGLEERRRALGMNSGYDAWLRQQQRVGSATVTKLFPASGLAS
SSSLLDEAATPADLSTLLLKSQIDSAAAVRDRKVAAFLAAVDAVFLNLRF
DALEGHARFPFHFATAVPGQMKVPVAMWMQAVSKMAEYQRQVSEASQAAD
LLKAYTSYSAFSQALLYKLMQLWFETASSDAKEYLALPSWEEYEAMVQAK
R
3D structure
PDB8a22 Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
ChainBj
Resolution2.91 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Bj V95 K97 R98 V87 K89 R90
BS02 rna Bj R91 P93 F94 D96 R98 R106 R83 P85 F86 D88 R90 R98
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 23:19:51 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '8a22', asym_id = 'Bj', title = 'Structure of a mitochondrial ribosome with fragm...rRNA in complex with membrane-targeting elements.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='8a22', asym_id='Bj', title='Structure of a mitochondrial ribosome with fragm...rRNA in complex with membrane-targeting elements.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003735,0005840,0006412', uniprot = '', pdbid = '8a22', asym_id = 'Bj'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0005840,0006412', uniprot='', pdbid='8a22', asym_id='Bj')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>