Structure of PDB 6skf Chain Bj
Receptor sequence
>6skfBj (length=47) Species:
311400
(Thermococcus kodakarensis) [
Search protein sequence
]
ARFPEAEARIFRKLVCMRCGATNPWGAKKCRKCGYKGLRPKAREPRG
3D structure
PDB
6skf
Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping.
Chain
Bj
Resolution
2.95 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
Bj
M18 T23 P25 K30 Y36 R40 K42 A43 R47
M17 T22 P24 K29 Y35 R39 K41 A42 R46
BS02
ZN
Bj
C17 C20
C16 C19
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0006412
translation
Cellular Component
GO:0005840
ribosome
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6skf
,
PDBe:6skf
,
PDBj:6skf
PDBsum
6skf
PubMed
32555463
UniProt
Q5JJD3
|RL40_THEKO Large ribosomal subunit protein eL40 (Gene Name=rpl40e)
[
Back to BioLiP
]