Structure of PDB 9f1d Chain Be

Receptor sequence

>9f1dBe (length=130) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

AALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKG
QILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAH
NVSSKNRKAIVERAAQLAIRVTNPNARLRS

3D structure

PDB

9f1d NAC guides a ribosomal multienzyme complex for nascent protein processing.

Chain

Resolution

3.26 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Be	R5 K14 K15 R16 K18 K19 F20 R22 H23 Q24 D26 Y28 V29 K30 I31 R33 N34 W35 R36 K37 R39 G40 I41 D42 N43 R44 R46 R47 R48 K50 G51 Q52 N57 I58 G59 Y60 G61 S62 N63 K64 K65 H68 K76 K83 E98 A100 H101 N102 S104 K106 N107 R108 N124 A127 R128 R130	R4 K13 K14 R15 K17 K18 F19 R21 H22 Q23 D25 Y27 V28 K29 I30 R32 N33 W34 R35 K36 R38 G39 I40 D41 N42 R43 R45 R46 R47 K49 G50 Q51 N56 I57 G58 Y59 G60 S61 N62 K63 K64 H67 K75 K82 E97 A99 H100 N101 S103 K105 N106 R107 N123 A126 R127 R129

External links