Structure of PDB 6ydw Chain Bb

Receptor sequence
>6ydwBb (length=354) Species: 9823 (Sus scrofa) [Search protein sequence]
RRAAPLGPMPNEDIDVSDLERLKKYRSFDRYRRRAEQEARKPHWWRTYRE
HFGEESGPKDRVDIGLPPPKVSRTQQLLERKQALRELRANVEEERAARLQ
TARIPLEAVRAEWERTCGPYHKQRLAEYCGLYRDLFHGATFVPRVPLHVA
YAVGEDDLMPVYHGNEVTPTEAAQAPEVTYEADEGSLWTLLLTNLDGHLL
EPDAEYVHWLVTNIPGNRVTEGQETCPYLPPFPARGSGFHRFAFLLFKQD
KRIDFSGDTRPSPCYQLAQRTFHTFDFYKKHQDAMTPAGLAFFQCRWDDS
VTRVFHQLLDMREPVFEFVRPPPYHPKQKRFPHRQPLRYLDRYRDSHEPT
YGIY
3D structure
PDB6ydw Structural insights into mammalian mitochondrial translation elongation catalyzed by mtEFG1.
ChainBb
Resolution4.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Bb R27 R28 R72 H351 H359 R360 R364 R368 T376 G378 I379 Y380 R1 R2 R46 H325 H333 R334 R338 R342 T350 G352 I353 Y354
BS02 rna Bb R52 S53 R56 L103 R106 T142 Y146 R26 S27 R30 L77 R80 T116 Y120
Gene Ontology
Cellular Component
GO:0005739 mitochondrion
GO:0005762 mitochondrial large ribosomal subunit
GO:0005829 cytosol
GO:0005840 ribosome

View graph for
Cellular Component
External links
PDB RCSB:6ydw, PDBe:6ydw, PDBj:6ydw
PDBsum6ydw
PubMed32602580
UniProtF1RW03

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